LOC_Os03g40270

Expression Profile

RGAP LOCUS ID LOC_Os03g40270
RAP-DB ID Os03g0599800
Function alpha-1,4-glucan-protein synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 11

2) CELLO Prediction
localization Cytoplasmic
score 2.01

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Cytoplasm
score 97
confidence value 0.72
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsUAM1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.113
NLS score -0.47
Protein Sequence >LOC_Os03g40270.1 protein
MAGTVTVPSASVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMV
SKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMVKPRERNSRYV
DAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFF
QNATIPKECDTVQKCYLSLAEQVREKLGKIDPYFVKLADAMVTWIEAWDELNPSTAAVENGKAK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Biological Process
GO Term carbohydrate metabolic process
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term catalytic activity
7
GO Category Biological Process
GO Term cellular process
8
GO Category Biological Process
GO Term biological_process
9
GO Category Cellular comBiological Processonent
GO Term cell wall
10
GO Category Molecular Function
GO Term protein binding
11
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
12
GO Category Cellular comBiological Processonent
GO Term cytosol
13
GO Category Biological Process
GO Term response to stress
14
GO Category Biological Process
GO Term response to abiotic stimulus
15
GO Category Cellular comBiological Processonent
GO Term ribosome
Presence of Splice variants No