LOC_Os03g37984
| RGAP LOCUS ID | LOC_Os03g37984 | ||||
| RAP-DB ID | Os03g0576900 | ||||
| Function | amino acid permease family protein, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | plas | ||||
| score | 12 | ||||
2) CELLO Prediction |
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| localization | PlasmaMembrane | ||||
| score | 4.947 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.15 | ||||
4) Y-Loc Prediction |
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| localization | Chloroplast | ||||
| score | 9 | ||||
| confidence value | 0.4 | ||||
| Number Of Software Predicting Nucleus | 0 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsPAR1 | ||||
| Function assigned as per literature | OsPAR1 is responsible for intracellular transport of paraquat | ||||
| Subcellular localization as per literature | golgi appartus | ||||
| Cells used for localization experiment | protoplasts prepared from mature leaves of 5-week-old Arabidopsis plants | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 23471133 | ||||
| Reference of localization | http://www.plantphysiol.org/content/plantphysiol/early/2013/03/07/pp.113.213892.full.pdf | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.069 | ||||
| NLS score | -0.47 | ||||
| Protein Sequence | >LOC_Os03g37984.1 protein MTNAWISPSVVALCPSPLPSSRLPGSVLSCWPDSRGIRRGAGEGTAGQTLRPARGFTVEKLRNTAITRANSACLPMEDCVGIKYSSVNEGEERKGGHGVP KVSIIPLIFLIFYEVSGGPFGIEDSVKAAGPLLAIAGFLLFALIWSVPEALITAEMGTMFPENGGYVVWVSSALGPFWGFQQGWAKWLSGVIDNALYPVL FLDYVKSSIPALGGGLPRTLAVLILTVALTYMNYRGLTIVGWVAVFLGVFSLLPFFVMGLIAIPRIEPSRWLEMDLGNVNWGLYLNTLFWNLNYWDSIST LAGEVENPKRTLPRALSYALVLVVGGYLYPLITCTAAVPVVREFWTDGYFSDVARILGGFWLHSWLQAAAALSNMGNFVTEMSSDSYQLLGMAERGMLPE FFAKRSRYGTPLIGIMFSAFGVVLLSWMSFQEIIAAENYLYCFGMILEFIAFIKLRVVHPNASRPYKIPLGTIGAVLMIIPPTILIVVVMMLASFKVMVV SIMAMLVGFVLQPALVYVEKRRWLKFSISAELPDLPYSNVEEDSTIPLVC |
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GO Analysis |
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| 2 |
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| 3 |
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| Presence of Splice variants | YES | ||||