LOC_Os03g32230

Expression Profile

RGAP LOCUS ID LOC_Os03g32230
RAP-DB ID Os03g0437200
Function ZOS3-12 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 1.77

3) NUCPRED Prediction
localization Non Nuclear
score 0.51

4) Y-Loc Prediction
localization Nuclear
score 75.13
confidence value 0.09
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category C2H2

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BSR-D1|ZFP36
Function assigned as per literature BSR-D1 promotes peroxidase expression, suppressing immunity to Magnaporthe oryzae
Subcellular localization as per literature Nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 28666113
Reference of localization https://www.cell.com/cell/fulltext/S0092-8674(17)30649-9
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.13
Protein Sequence >LOC_Os03g32230.1 protein
MTAALQALLDPTALSLGLPTPAINKEEYLAICLAALACTRAGKALVGVGGQQQVQACNKWLCPAPAAPEELRFRCTVCGKAFASYQALGGHKSSHRKPPS
PGDHYGAAAAAQQLASAGDSKEDSASSAAGSTGPHRCTICRRSFATGQALGGHKRCHYWDGTSVSVSVSASASAASSAVRNFDLNLMPLPESTAAAGIKR
WAEEEEVQSPLPVKKLRMSN

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Biological Process
GO Term biological_process
6
GO Category Molecular Function
GO Term DNA binding
7
GO Category Molecular Function
GO Term binding
8
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
9
GO Category Cellular comBiological Processonent
GO Term nucleus
10
GO Category Molecular Function
GO Term nucleic acid binding
11
GO Category Biological Process
GO Term response to endogenous stimulus
12
GO Category Biological Process
GO Term growth
13
GO Category Biological Process
GO Term photosynthesis
Presence of Splice variants No