LOC_Os03g29980

Expression Profile

RGAP LOCUS ID LOC_Os03g29980
RAP-DB ID Os03g0413100
Function ACT domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 2.534

3) NUCPRED Prediction
localization Non Nuclear
score 0.41

4) Y-Loc Prediction
localization Cytoplasm
score 92
confidence value 0.88
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ACR7
Function assigned as per literature ACR7 is involved in the glutamine-sensing system in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Cultured rice cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 16720649
Reference of localization https://academic.oup.com/pcp/article/47/7/891/2468956
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.136
NLS score -0.04
Protein Sequence >LOC_Os03g29980.2 protein
MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVM
DRKTGLAISDTQRLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLF
DTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTRG
DKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFLFSSLFRPRSLYSLGLIRS

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No