LOC_Os03g29260

Expression Profile

RGAP LOCUS ID LOC_Os03g29260
RAP-DB ID Os03g0406200
Function elongation factor protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Cytoplasmic
score 1.309

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Cytoplasm
score 97
confidence value 0.72
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) EF-1beta2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.102
NLS score -0.47
Protein Sequence >LOC_Os03g29260.2 protein
MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEE
DDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDS
LIEDYFYTEPANEFIQSCDIVAFNKI

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Molecular Function
GO Term translation factor activity, nucleic acid binding
4
GO Category Biological Process
GO Term translation
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No