LOC_Os03g27770

Expression Profile

RGAP LOCUS ID LOC_Os03g27770
RAP-DB ID Os03g0395000
Function heme oxygenase 2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Chloroplast
score 1.518

3) NUCPRED Prediction
localization Non Nuclear
score 0.16

4) Y-Loc Prediction
localization Cytoplasm
score 42
confidence value 0.02
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHO2|HO2|OsYLC2
Function assigned as per literature OsHO2 has a potential regulatory role for tetrapyrrole biosynthesis in rice
Subcellular localization as per literature Chloroplast (stroma)
Cells used for localization experiment Nicotiana benthamiana leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25037719
Reference of localization https://link.springer.com/article/10.1007%2Fs00425-014-2116-0
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 4
Number of Bipartite 0
Basic residues % 0.127
NLS score 1.24
Protein Sequence >LOC_Os03g27770.1 protein
MPLAAAVAASAVVPPRPPPPPPRRARPLRSFTGLILTRDLAALTVARCAPSPPAPAAEAEAEAVAVDEAPPAKPRPRRYPRQYPGEAVGVAEEMRFVAMR
LRNPKRTTLKMDDTGAEEEVGDGVSEDASASEEEEEEEDDDDVVEEEEEGAGLEGEWMPSMEGFVKYLVDSKLVFDTVERIVAESTDVAYVYFRKSGLER
SARITKDLEWFGGQGIAVPEPSTAGSTYATYLTELAESNAPAFLSHYYNIYFAHTTGGVAIGNKISKKILEGRELEFYKWDSDVELLLKDTREKLNELSK
HWSRKDRNLCLKEAAKCFQHLGRIVRLIIL

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term catabolic process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No