LOC_Os03g24600

Expression Profile

RGAP LOCUS ID LOC_Os03g24600
RAP-DB ID Os03g0360700
Function peptide methionine sulfoxide reductase msrB, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Cytoplasmic
score 1.732

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.97
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMSR1
Function assigned as per literature is one of the partner proteins of OsGIRP1
Subcellular localization as per literature Cytosol
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25600999
Reference of localization https://link.springer.com/article/10.1007%2Fs00425-015-2242-3
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.47
Protein Sequence >LOC_Os03g24600.1 protein
MASSGDSSGKQRSDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSGCGWPAFFEGLPGAINRTPDPDGRRVEITCA
ACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFTPAS

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No