LOC_Os03g24220

Expression Profile

RGAP LOCUS ID LOC_Os03g24220
RAP-DB ID Os03g0356700
Function villin protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Cytoplasmic
score 2.713

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.98
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) VLN2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.115
NLS score -0.47
Protein Sequence >LOC_Os03g24220.2 protein
MSSAKPVLDPAFQGVGQKPGTEIWRIQDFKPVPLPKADYGKFYNGDSYIVLQTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQH
RELQGYESDKFLSYFKPCIIPLEGGFASGFKTPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAIQHL
KETYHNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKAICDDDVVLETTAPKLYSINNGQLKLEDTVLTKSILENNKCFLVDCGSDLFIWVGRLTQ
VEERKAASAAVEEFIATQNRPKTTRVTRVIQGYENHTFKSKFESWPVNSAGSAGAEEGRGKVAALLKQQGVDIKGASKSSAPVDEEVPPLLEGDGKLEVY
CVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQPMVILKGGI
SSGYQKFVEEKGLKDETYSGDGIALFRISGTSIHNNKVLQVDAVSSNLSPTDCFVLQSGNSMFTWIGNASSYEQQQWAAKVAEFLKPGVAVKHCKEGTES
SAFWFALGGKQNYTSRNATHDVVREPHLYTFSLRNG

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Biological Process
GO Term cellular component organization
3
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES