| RGAP LOCUS ID |
LOC_Os03g24040 |
| RAP-DB ID |
Os03g0356414 |
| Function |
seven in absentia protein family domain containing protein, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
7 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
1.545 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.11 |
4) Y-Loc
Prediction
|
| localization |
Chloroplast |
| score |
5 |
| confidence value |
0.06 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsDIS1 |
| Function assigned as per literature |
OsDIS1 plays a negative role in drought stress through transcriptional and posttranslational regulation of diverse stress-related genes in rice |
| Subcellular localization as per literature |
Predominantly in the nucleus, as well as some in the cytoplasm and plasma membrane |
| Cells used for localization experiment |
Nicotiana benthamiana leaves and rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
21719639 |
| Reference of localization |
http://www.plantphysiol.org/content/157/1/242.long |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.11 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g24040.1 protein
MASVTYIDDSGSEVIDPPKTEVLDVTELAGDPVPHSPKPNVVVSSSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLAL
EKVAASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDDHKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCF
GQYFCLHFEAFQLGMAPVYIAFLRFMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGERKELKLRVTGRIWKE
Q |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
protein metabolic process |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
catabolic process |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
binding |
|
| 8 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| Presence of Splice variants |
No |
