LOC_Os03g22810

Expression Profile

RGAP LOCUS ID LOC_Os03g22810
RAP-DB ID Os03g0351500
Function copper/zinc superoxide dismutase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Extracellular
score 1.152

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.27
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SodCc7
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.078
NLS score -0.47
Protein Sequence >LOC_Os03g22810.1 protein
MVQVISDELRLSPLTGRALNTGQRRIYPVVPNYLDTGSSAKELGVTERRQSVTLGARALNVGWWLQLQAASLTTNTTAHRWREGNLPEAPDSKPAGVASP
PPSSSSSSPRGSPEITLTMVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGD
LGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Biological Process
GO Term response to biotic stimulus
6
GO Category Biological Process
GO Term biological_process
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
8
GO Category Cellular comBiological Processonent
GO Term cytosol
9
GO Category Molecular Function
GO Term binding
10
GO Category Cellular comBiological Processonent
GO Term extracellular region
11
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants No