LOC_Os03g22680

Expression Profile

RGAP LOCUS ID LOC_Os03g22680
RAP-DB ID Os03g0348900
Function RING finger and CHY zinc finger domain-containing protein 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Extracellular
score 2.955

3) NUCPRED Prediction
localization Non Nuclear
score 0.16

4) Y-Loc Prediction
localization Cytoplasm
score 62
confidence value 0.63
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSRFP1|SDEL2
Function assigned as per literature OsSRFP1 may have dual functions in post-translational and transcriptional regulations in modulating abiotic stress responses in rice, at least in part, by negatively regulating antioxidant enzymes-mediated reactive oxygen species removal.
Subcellular localization as per literature Nucleus
Cells used for localization experiment rice leaf protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 25667045
Reference of localization https://link.springer.com/article/10.1007/s11103-015-0294-1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.115
NLS score -0.47
Protein Sequence >LOC_Os03g22680.1 protein
MELDDASRHGFGRMGFGCKHYRRRCRIRAPCCNDVFHCRHCHNESTKDGHELDRHAVESVICLVCDTEQPVAQVCYNCGVCMGEYFCSACKFFDDDVDRE
HFHCQDCGICRVGGKDNFFHCEKCGSCYSVSLRDKHCCIENSMKNNCPICYEYLFDSLRETSVLRCGHTMHLQCFHEMLKHDKFSCPICSMPIFDMDKFL
RALDAEIEANMLHIDYMGKGWIVCNDCRDTTQVYARVAGHKCCHCQSHNTCRVAAPVLPA

GO Analysis
1
GO Category Molecular Function
GO Term binding
Presence of Splice variants YES