LOC_Os03g21460

Expression Profile

RGAP LOCUS ID LOC_Os03g21460
RAP-DB ID Os03g0332400
Function metallo-beta-lactamase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Cytoplasmic
score 3.555

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.88
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGLYII2
Function assigned as per literature OsGLYII2 functions in salinity adaptation by maintaining better photosynthetic effficiency and anti-oxidant pool
Subcellular localization as per literature cytosol
Cells used for localization experiment onion epidermal cells 
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25039836
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.12621
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.109
NLS score -0.47
Protein Sequence >LOC_Os03g21460.1 protein
MKIIPVACLEDNYAYLIVDESTKSAAAVDPVEPEKVLAAAAEVGVRIDCVLTTHHHWDHAGGNEKMAQSVPGIKVYGGSLDNVKGCTDQVENGTKLSLGK
DIEILCLHTPCHTKGHISYYVTSKEEEDPAVFTGDTLFIAGCGRFFEGTAEQMYQSLCVTLGSLPKPTQVYCGHEYTVKNLKFILTVEPDNEKVKQKLEW
AQKQREANQPTIPSTIGEEFETNTFMRVDLPEIQAKFGAKSPVEALREVRKTKDNWKS

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Biological Process
GO Term catabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No