LOC_Os03g21060

Expression Profile

RGAP LOCUS ID LOC_Os03g21060
RAP-DB ID Os03g0327800
Function No apical meristem protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 3.887

3) NUCPRED Prediction
localization Non Nuclear
score 0.68

4) Y-Loc Prediction
localization Nuclear
score 89.43
confidence value 0.46
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category NAC

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAP
Function assigned as per literature OsNAP acts as a positive regulator of leaf senescence via the JA pathway
Subcellular localization as per literature Nucleus
Cells used for localization experiment onion peel cells and Arabidopsis protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 24028154
Reference of localization https://bmcplantbiol.biomedcentral.com/articles/10.1186/1471-2229-13-132
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.092
NLS score 0.27
Protein Sequence >LOC_Os03g21060.1 protein
MVLSNPAMLPPGFRFHPTDEELIVHYLRNRAASSPCPVSIIADVDIYKFDPWDLPSKENYGDREWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIH
SSGGAATNESVGVKKALVFYKGRPPKGTKTNWIMHEYRLAAADAHAANTYRPMKFRNTSMRLDDWVLCRIYKKSSHASPLAVPPLSDHEQDEPCALEENA
PLYAPSSSSAASMILQGAAAGAFPSLHAAAAATQRTAMQKIPSISDLLNEYSLSQLFDDGGAAAAAPLQEMARQPDHHHHQQQQHALFGHPVMNHFIANN
SMVQLAHLDPSSSAAASTSAGAVVEPPAVTGKRKRSSDGGEPTIQALPPAAAAAKKPNGSCVGATFQIGSALQGSSLGLSHQMLLHSNMGMN

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No