LOC_Os03g20680

Expression Profile

RGAP LOCUS ID LOC_Os03g20680
RAP-DB ID Os03g0322900
Function late embryogenesis abundant protein 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization chlo
score 4

2) CELLO Prediction

localization Nuclear
score 1.195

3) NUCPRED Prediction

localization Non Nuclear
score 0.35

4) Y-Loc Prediction

localization Nuclear
score 93.53
confidence value 0.15
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020) OsLEA3-2
Function assigned as per literature OsLEA3-2 plays an important role in tolerance to abiotic stresses
Subcellular localization as per literature Nucleus
Cells used for localization experiment onion epidermis cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 23024799
Reference of localization http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0045117
Is Subcellular localization evidence by author available ? No

Sequence Analysis

Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.186
NLS score -0.47
Protein Sequence >LOC_Os03g20680.1 protein
MASRQDRREARAEADARRAAEEIARARDERVMQAEVDARSAADEIARARADRGAATMGADTAHHAAGGGGILESVQEGAKSFVSAVGRTFGGARDTAAEK
TSQTADATRDKLGEYKDYTADKARETNDSVARKTNETADASRDKLGEYKDYTADKTRETKDAVAQKASDASEATKNKLGEYKDALARKTRDAKDTTAQKA
TEFKDGVKATAQETRDATADTARKAKDATKDTTQTAADKARETAATHDDATDKGQGQGLLGALGNVTGAIKEKLTVSPAATQEHLGGGEERAVKERAAEK
AASVYFEEKDRLTRERAAERVDKCVEKCVEGCPDATCAHRHGKM

GO Analysis

1
GO Category Biological Process
GO Term reproduction
2
GO Category Biological Process
GO Term post-embryonic development
3
GO Category Biological Process
GO Term embryo development
Presence of Splice variants No