| RGAP LOCUS ID |
LOC_Os03g20370 |
| RAP-DB ID |
Os03g0319300 |
| Function |
OsCam1-1 - Calmodulin, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
4 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
3.154 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.03 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
88 |
| confidence value |
0.7 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsCam1-1 |
| Function assigned as per literature |
OsCam1-1 mediates downstream HS-related gene expression for the acquisition of thermotolerance in rice. |
| Subcellular localization as per literature |
Nucleus |
| Cells used for localization experiment |
Arabidopsis protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
22428987 |
| Reference of localization |
https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-3040.2012.02508.x |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.101 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g20370.1 protein
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF
ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK |
GO Analysis |
| 1 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 2 |
| GO Category |
Molecular Function |
| GO Term |
binding |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
biological_process |
|
| Presence of Splice variants |
No |
