LOC_Os03g20020

Expression Profile

RGAP LOCUS ID LOC_Os03g20020
RAP-DB ID Os03g0314800
Function plant neutral invertase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 7.5

2) CELLO Prediction
localization PlasmaMembrane
score 1.442

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.62
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNIN1
Function assigned as per literature OsNIN1 encodes an alkaline/neutral invertase localized in organelles
Subcellular localization as per literature Mitochondria
Cells used for localization experiment Leaves of day-flower
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17086397
Reference of localization https://link.springer.com/article/10.1007/s00425-006-0430-x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.104
NLS score -0.47
Protein Sequence >LOC_Os03g20020.1 protein
MAAAAISHLRRGAPRHARALLYLSTRRFSSSSAAGVAPLAAVAASARRLLSTSVDSGASSTGESYKPPLFDPFRAASLASSAPPLESPPIEELPDDATPP
PEEEPGLPAPEKDPVATACQHELEGLKAWVETVRSRKESTEEKEAWSLLGRSVVSYCGTAVGTVAANDPSTANQMLNYDQVFIRDFVPSAIAFLLKGEGD
IVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRSIPLDGNSEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRL
ILNLCLSDGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCAREMVSVNDGSNSLIRAINYRLSALSFHIREYYWVDMKKINEIYRYKTEEYS
HDAINKFNIYPEQIPSWLADWIPEKGGYLIGNLQPAHMDFRFFSLGNLWAIISSLATQRQAEGILNLIEAKWEDIIANMPLKICYPALEYEEWRIITGSD
PKNTPWSYHNGGSWPTLLWQFTLACIKMGRRDLAQRAIEVAEKRLSEDKWPEYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLE
LLEGCACSVNKSARTKCSRRAARSQVLV

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Biological Process
GO Term response to stress
6
GO Category Cellular comBiological Processonent
GO Term mitochondrion
7
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No