LOC_Os03g19420

Expression Profile

RGAP LOCUS ID LOC_Os03g19420
RAP-DB ID Os03g0307200
Function nicotianamine synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Cytoplasmic
score 1.717

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 93
confidence value 0.63
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAS2
Function assigned as per literature OsNAS2 is responsible for Fe homeostasis in plants
Subcellular localization as per literature Cytoplasm
Cells used for localization experiment tobacco BY-2 cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24704865
Reference of localization https://www.tandfonline.com/doi/full/10.4161/psb.28660
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.092
NLS score -0.47
Protein Sequence >LOC_Os03g19420.2 protein
MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEAQAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFP
YYGNYVNLSKLEYDLLVRYVPGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVATLTGELGAYDV
VFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGARGFLYPIVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADPRRGGGLAGARGAVPVVSPP
CKCCKMEAAAGAFQKAEEFAAKRLSV

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No