LOC_Os03g19280

Expression Profile

RGAP LOCUS ID LOC_Os03g19280
RAP-DB ID Os03g0305500
Function argininosuccinate lyase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Cytoplasmic
score 2.337

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.33
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsASL1
Function assigned as per literature OsASL1 is involved in normal root development of rice
Subcellular localization as per literature OsASL1.1 ( plastid) and OsASL1.2(Nucleus and cytosol)
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 25764439
Reference of localization https://www.tandfonline.com/doi/full/10.4161/psb.28717
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os03g19280.1 protein
MAAATSQSFLSPAPNPLLRPRILPFPAGGSVSLRGRRPAFPSVAAASTSMASSESEERKETKLWGGRFEEGVTDAVEGFTESISYDWQLYKYDIMGSKAH
ASMLAAQGLITAGDKDIILEGLDQIEKLIQDGKFEWRTDREDVHMNIEAALIEKVGEPAKKLHTARSRNDQIVTDLRLWCRDAIDKILFRIKQFQVSLVL
LASKYVDLIVPGYTHLQRAQPVLLPHLLLSYVEQLERDAGRLVNCRERLNFCPLGACALAGTGLPIDRFKTAKDLKFTAPMKNSIDAVSDRDFVLEFLAA
NSIAAVHLSRIGEEWVLWASEEFGFLTPSDSVSTGSSIMPQKKNPDPMELVRGKSARVFGDLMTVLTLCKGLPQAYNRDLQEDKEPLFDSVKAVLGMLEV
CTEFAQNISFNSKRIQSSLPAGYLDATTLADYLVKKGVPFRTSHEIVGRSVALCVSKNCQLAELGLDDLKSVHPVFEGDVYEYLGVENAVNKFISYGSTG
SEQVKKQLEDWRTQLGISS

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No