LOC_Os03g19010

Expression Profile

RGAP LOCUS ID LOC_Os03g19010
RAP-DB ID Os03g0302000
Function peroxisomal biogenesis factor 11, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Mitochondrial
score 1.234

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.05
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPEX11
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.132
NLS score -0.47
Protein Sequence >LOC_Os03g19010.1 protein
MAAAAAAAGSSDSRKPAAHPPPRDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPAASARLKSFESSVGLSRKAFRLGKFVQNVNALRAHPHPP
PAVALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLPRLQRLSAWAELLGYVGSITIKLEEIGKLESSVKMRLKEGCREESDVVRTLRVKLLLKRMSVVQDV
ADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNSC

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term molecular_function
4
GO Category Cellular comBiological Processonent
GO Term membrane
5
GO Category Cellular comBiological Processonent
GO Term peroxisome
6
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants No