LOC_Os03g18710

Expression Profile

RGAP LOCUS ID LOC_Os03g18710
RAP-DB ID Os03g0298700
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 3.923

3) NUCPRED Prediction
localization Nuclear
score 0.83

4) Y-Loc Prediction
localization Nuclear
score 65.64
confidence value 0.57
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSCAR2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.04
Protein Sequence >LOC_Os03g18710.1 protein
MPLSRHEVGNEYSLGGRELYRRANQHDPEAVLDGVAMAGLVGVLRQLGDLAEFAAQVFHGLYDEVMTASARGHGLMLRVQQLEAELPLVEKDSCHTDYLY
VASNRGIEWHSNPRLESGVVTKGDTPRFIMDSIKKCHGPPKLFMLDKYDIGGEGACLKRYTDPSFFKTDSACSSMLEQGIQRERRPLRAMEIRPTLQNSE
IFRPPNAANNDSKLETDLSGEALDEVPTRRRQLKYRQLNGSVFRSFRPQMQNLYGETSPDEKPCSMNHSEVQISFTDSPDTNTEERDIMVDTFSSMDKGK
ENNYVMAGKNRLLSEEALSRSSDARSAGSSKGYNSEVDIYVDALTTMDSEVETDTEHRDHGHRALVPVESSKPCSDVHGAAVSGSISFRNNGSMVPNSSD
VVPAEEENNDHHQGYVCVPSPQAKPVAGEHERSSSLEELFAQEKPVSCEHERTSSLEELLLGDVHPSGHNMRSSATESNTNGVVSTVESNGTVGTTKKEK
DNPIIAGISFKKTASKKSKYVGSMELIVSKVGILPRKLSKKHDPFSDSLRNMAKQLLELKIDGTKDTELYEFEANGEGCDMKCLEMSHPPIEIMGSATQS
VPPDSPQDNVDSRACRPEEVNQEYDHDVPPSDSPQDSVDGNVFRDIALLRSQEEQQCAGPVTVDNLLDHAPENTQDQIGEHFYREVTEDIHTEVVPENGP
DIGEELEEGSITEEKVNEEDVEESNESDAYTLDENTEYIEEQVVSDDLISSPISSKQSDDPCQMAPLTLTDADDALAGKNVDNDISEMHITLSGTITESN
VSTVVVESATTNDVAVQYNEQCCLHPETSFAQDLTHVSSCEVEGQNEPLPLCSSSMVGTTPDLSVDTEEIHENPILCIDSSSDLFRDALAPDSRDVPLPN
ISSFDWMLNGAMQKSLNVLPAKPPNGILQENNSSKDTEDAPPPLPPLPPMQWRTTKLQPGPAVLSAKFGRPPRPKPPVKYQENESYSSQDERNREPEILQ
EASLQNGSTSVTPEKEMVVAKVSNEIQTNIMFGRDSQESHLKGLNEYDVQASDSFSTSEFKSVGGVASVEGDNLETSQLSELIVIPEEAWSELVDIKSIS
GQEKGGKRQLSTGVFNCNGMHTTGLSAEKRDDYKIYDQNEKNLLAGKGNAIADSEEKEPNGVTCQDDTKNSDLLVQQEDGQHDSSAGTARESSSSFEEEV
AKFSPPRVPTPPKYPLFQVTAHDRSMLKRAPTLVQPSIKLSDENNTILEQIKNKSFNLKPVLAKRPNMMGAPRTNLQVVAILERANAIRQAVADDDDEDS
WSD

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cytoplasm
2
GO Category Biological Process
GO Term cellular component organization
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term anatomical structure morphogenesis
5
GO Category Biological Process
GO Term cell differentiation
6
GO Category Biological Process
GO Term multicellular organismal development
7
GO Category Molecular Function
GO Term molecular_function
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No