LOC_Os03g18200

Expression Profile

RGAP LOCUS ID LOC_Os03g18200
RAP-DB ID Os03g0293000
Function heat shock protein DnaJ, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 7

2) CELLO Prediction
localization Mitochondrial
score 2.096

3) NUCPRED Prediction
localization Non Nuclear
score 0.38

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.11
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsERdj3A
Function assigned as per literature
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24153418
Reference of localization https://academic.oup.com/jxb/article/64/18/5429/608148
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.131
NLS score 0.21
Protein Sequence >LOC_Os03g18200.1 protein
MGIPVRSLLVASIVLSSIALHVAAAKNLDPYKVLGVDKSASQRDIQKAFHKLSLKYHPDKNKSKGAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGNPG
FGGGNFGNREGYTYFTGGGAKTSHFSSGDGWQTMGGQGNTKTFSFSFGGGNPGAGGGNPFNFDFGDVFSNIFSGGSMGGSQHTGSAGKARRGTKSSGHDS
SSVNIQEVTMQIFNKETADQGITWLLLFYTPNTKGQFVLESVVEDVARSLDGALRAGKVNCDHEKALCKKAGVSIGKSARLFIYSYTTTEKGSLHEYSGD
YDSKSLKTFCQEHLPRFSKRVDINQFSFPSNIIPNLPQVLLLSAKKDTPAMWRAVSGMFRSRLIFYDAEVQDVSHPLLKSLGVKNIPALIGRSVNGEEQL
LKDGISVKDLRSGIKELKNLLENFEKKNKKLASNQAKKPAHTDQPKENKIPLLTASNFEEICGEKTSVCILGIFKSSKAKENLEAVLSEISQKTLIRGQN
YNSGNAVAYALLDGNKQSAFLSTFDKSAFKSSDKLLLAYKPRRGRYAVYDNEVTMEEAESLPVTEYMLLVRNRTLVESLLLQQAGLCRLLAHTFGPAQRV
VGSKHSSPGPDLRMASRSLSPLSSASKLCSRCGQADEPKMAATTFSSSPSKVTTAKFVTGLRA

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term response to abiotic stimulus
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Biological Process
GO Term pollination
9
GO Category Biological Process
GO Term cellular component organization
10
GO Category Biological Process
GO Term anatomical structure morphogenesis
11
GO Category Biological Process
GO Term cell differentiation
12
GO Category Biological Process
GO Term cell growth
13
GO Category Biological Process
GO Term multicellular organismal development
14
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES