| RGAP LOCUS ID |
LOC_Os03g17790 |
| RAP-DB ID |
Os03g0286900 |
| Function |
OsRCI2-5 - Putative low temperature and salt responsive protein, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
vacu |
| score |
12 |
2) CELLO
Prediction
|
| localization |
PlasmaMembrane |
| score |
2.414 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0 |
4) Y-Loc
Prediction
|
| localization |
Secreted pathw |
| score |
|
| confidence value |
1 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsRCI2-5 |
| Function assigned as per literature |
OsRCI2-5 is responsible for drought resistance in rice |
| Subcellular localization as per literature |
Cell membrane |
| Cells used for localization experiment |
Onion epidermal cells |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
24938613 |
| Reference of localization |
http://www.funpecrp.com.br/gmr/year2014/vol13-2/pdf/gmr3995.pdf |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.019 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g17790.1 protein MASATFLEVLLAIFLPPVGVFLRYGLGIEFWIDLLLTILGYIPGIIYAVYVLVA |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cell |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
membrane |
|
| Presence of Splice variants |
No |
