LOC_Os03g17310

Expression Profile

RGAP LOCUS ID LOC_Os03g17310
RAP-DB ID Os03g0281466
Function calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 3.518

3) NUCPRED Prediction
localization Non Nuclear
score 0.18

4) Y-Loc Prediction
localization Cytoplasm
score 85
confidence value 0.9
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) osECA1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.097
NLS score -0.04
Protein Sequence >LOC_Os03g17310.1 protein
MGKGGQEEGKRRDGSDASGSEPAAAAFPAWARTPSECLAELGVAADRGLSSEEAAARLRRYGPNELERHAAPSVWKLVLEQFDDTLVRILLAAAVVSFVL
ALYDGAEGGEVGATAFVEPLVIFLILIVNAVVGVWQESNAEKALEALKEIQSEHATVKRDGRWSHGLPARDLVPGDIVELRVGDKVPADMRVLQLISSTL
RVEQGSLTGETASVNKTSHKIELEDTDIQGKECMVFAGTTIVNGSAVCVVTGTGMDTEIGKIHAQIQEASQEEDDTPLKKKLNEFGEALTAIIGVICALV
WLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSAV
KLVAIGRWPDTLRSFKVDGTTYDPSDGKINEWPSLSMDENLQMIAKIAAVCNDASIAHSEHQYVATGMPTEAALKVLVEKMGLPGGYTPSLDSSDLLRCC
QWWNNAAKRVATLEFDRTRKSMGVIVKKADSGKNLLLVKGAVENLLERSGYIQLLDGSVVLLDEGAKALILSTLREMSASALRCLGFAYKEDLAEFATYD
GEEHAAHKYLLDPSYYSSIESNLIFCGFVGLRDPPREEVHKAIEDCRAAGIRVMVITGDNKETAEAICREIGVFGSTEDISSKSFTGKEFMSLSDKKKLL
RQTGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISS
NIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYMVIGMYVGIATVGVFIIWYTHGSFLGIDLA
GDGHSLVSYSQLSNWGQCSSWEGFKVSPFTAGARTFNFDVNPCDYFQGGKIKATTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGL
HFLILYVPFLAQVFGIVPLSFNEWLLVIAVAFPVVLIDEVLKFVGRCLTARARKQSGKQKED

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Molecular Function
GO Term hydrolase activity
6
GO Category Molecular Function
GO Term transporter activity
7
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
8
GO Category Biological Process
GO Term biosynthetic process
9
GO Category Biological Process
GO Term catabolic process
10
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No