LOC_Os03g16900

Expression Profile

RGAP LOCUS ID LOC_Os03g16900
RAP-DB ID Os03g0277000
Function rab GDP dissociation inhibitor alpha, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 12

2) CELLO Prediction
localization Cytoplasmic
score 2.1

3) NUCPRED Prediction
localization Non Nuclear
score 0.19

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.98
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGDI3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.125
NLS score 0.36
Protein Sequence >LOC_Os03g16900.1 protein
MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLNLTKLWKRFKGNETAPEHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLN
FKAVDGSFVYNNGKIHKVPATDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLEDDTVDFIGHALALHRDDNYLDEP
AIDTVKRMKLYAESLARFQGGSPYIYPLYGLAELPQAFARLSAVYGGTYMLNKAECKVEFDENGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGRVAR
AICIMKHPIPDTKDSHSVQIILPKKQLKRKSDMYVFCCSYAHNVAPKGKFIAFVSTEAEADKPEIELKPGIDLLGPVEETFFDIYDRYEPTNTADEDNCF
VTNSYDATTHFETTVKDVLALYSKITGKELDLSVDLNAASAAESEAA

GO Analysis
1
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2
GO Category Biological Process
GO Term catabolic process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term transport
5
GO Category Molecular Function
GO Term enzyme regulator activity
Presence of Splice variants No