LOC_Os03g16740

Expression Profile

RGAP LOCUS ID LOC_Os03g16740
RAP-DB ID Os03g0274800
Function protein kinase APK1A, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 1.263

3) NUCPRED Prediction
localization Non Nuclear
score 0.32

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.61
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRLCK107
Function assigned as per literature OsRLCK57, OsRLCK107 and OsRLCK118, positively regulate chitin- and PGN- induced responses in rice, similar to that observed in OsRLCK176
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28220451
Reference of localization https://thericejournal.springeropen.com/articles/10.1186/s12284-017-0145-6
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.123
NLS score -0.47
Protein Sequence >LOC_Os03g16740.1 protein
MGNCAGVQGNAEINPSFSAPNSSGTGSKNSSKNGADSSTFGTKASASSSVPPTPRSETEILQSSNLRKFTFGELKGSTRNFRPDSLLGEGGFGSVFKGWI
DERTLTPVKPGTGMIVAVKKLKLDSFQGHREWLAEVNYLGQLSHPNLVKLIGYCFEDEQRLLVYEFMPRGSLEHHLFRRGSHFQPLPWNLRMKVALEAAR
GLAFLHSDQAKVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPSGDKSHVSTRVMGTQGYAAPEYLATGHLTAKSDVYSYGVVLLELLSGQRALDKNRPPG
QHNLVEWARPYITNKRRVIHVLDSRLGSQYSLPAAQKIAGLAVQCLSMDARCRPGMDQVVTALEQLQGAKKAAK

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term kinase activity
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term protein modification process
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES