LOC_Os03g15880

Expression Profile

RGAP LOCUS ID LOC_Os03g15880
RAP-DB ID Os03g0265500
Function coronatine-insensitive protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 1.022

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Nuclear
score 71.87
confidence value 0.26
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCOI2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.47
Protein Sequence >LOC_Os03g15880.4 protein
MGGEAGERRLGRAMSFGIPDVALGLVMGFVEDPWDRDAISLVCRHWCRVDALSRKHVTVAMAYSTTPDRLFRRFPCLESLKLKAKPRAAMFNLIPEDWGG
SASPWIRQLSASFHFLKALHLRRMIVSDDDLDVLVRAKAHMLSSFKLDRCSGFSTSSLALVARTCKKLETLFLEDSIIAEKENDEWIRELATNNSVLETL
NFFLTDLRASPAYLTLLVRNCRRLKVLKISECFMLDLVDLFRTAEILQDFAGGSFDDQGQVEESRNYENYYFPPSLLRLSLLYMGTKEMQVLFPYGAALK
KLDLQFTFLSTEDHCQLVQRCPNLEILEVRDVIGDRGLEVVAQTCKKLQRLRVERGDDDQGGLEDEHGMVTQVGLMAVAQGCPHLEYWAVHVTDITNAAL
EAIGTYSSSLNDFRLVLLDREANITESPLDNGVRALLRGCTKLRRFAFYVRPGALSDVGLGYIGEFSKTIRYMLLGNVGESDQGLLQLSTGCPSLQKLEL
RGCFFSERALAVAVLQLKSLRYLWVQGYKASPNGTDLMAMVRPFWNIEIIAPNQDEVCPDGQAQILAYYSLAGMRSDYPHSVIPLYPSV

GO Analysis
1
GO Category Biological Process
GO Term cellular process
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to biotic stimulus
4
GO Category Biological Process
GO Term protein metabolic process
5
GO Category Biological Process
GO Term catabolic process
6
GO Category Biological Process
GO Term flower development
7
GO Category Biological Process
GO Term protein modification process
8
GO Category Cellular comBiological Processonent
GO Term intracellular
9
GO Category Biological Process
GO Term response to abiotic stimulus
10
GO Category Molecular Function
GO Term protein binding
11
GO Category Biological Process
GO Term response to endogenous stimulus
12
GO Category Molecular Function
GO Term catalytic activity
13
GO Category Biological Process
GO Term signal transduction
Presence of Splice variants YES