LOC_Os03g14180

Expression Profile

RGAP LOCUS ID LOC_Os03g14180
RAP-DB ID Os03g0245800
Function hsp20/alpha crystallin family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Chloroplast
score 4.133

3) NUCPRED Prediction
localization Non Nuclear
score 0.2

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.71
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Oshsp26
Function assigned as per literature OsHSP26 protein plays an important role in the protection of PSII during heat and oxidative stress in vivo
Subcellular localization as per literature Chloroplast
Cells used for localization experiment none
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21984008
Reference of localization https://link.springer.com/article/10.1007%2Fs10529-011-0769-3
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.154
NLS score 0.03
Protein Sequence >LOC_Os03g14180.1 protein
MAAPFALVSRVSPAARLPIRAAWRRARPTVGLPSSGRARQLAVASAAQENRDNTAVDVHVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTM
RQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMR
LALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQVQ

GO Analysis
1
GO Category Biological Process
GO Term response to abiotic stimulus
2
GO Category Biological Process
GO Term response to stress
3
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No