LOC_Os03g14000

Expression Profile

RGAP LOCUS ID

LOC_Os03g14000

RAP-DB ID

Os03g0243600

Function

acyl CoA binding protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

chlo

score

2) CELLO Prediction

localization

Cytoplasmic

score

2.267

3) NUCPRED Prediction

localization

Non Nuclear

score

0.21

4) Y-Loc Prediction

localization

Secreted pathw

score

confidence value

0.72

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsACBP5

Function assigned as per literature

OsACBP5 may be involved in lipid degradation and lipid biosynthesis

Subcellular localization as per literature

Tubular endoplamic reticulum

Cells used for localization experiment

Tobacco leaf epidermal cells

NUCLEAR or Not Nuclear

NOT NUCLEAR

PMID

24738983

Reference of localization

https://nph.onlinelibrary.wiley.com/doi/epdf/10.1111/nph.12809

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.079

NLS score

0.21

Protein Sequence

>LOC_Os03g14000.1 protein
MELFYELLLTAAASLLVAFLLARLLASAATASDPRRRAPDHAAVIAEEEAVVVEEERIIEVDEVEVKSARARECVVSEGWVEVGRASSAEGKLECLPEEE
EAPAKAARELVLDAVLEEREEEGQVGEERCDLAAAVAEVVGVKPHELGVEAAPGEVSDVTLEEGKVQDVGVEQHDLVAEAAPREALDTGLEKQGVPIIEA
VEIKRQDDLGAEVAPSDVPEVEFEQQGVRIIEAIDVNQHHRVALAAPAEVVDAGLEERVQAIEAGSSGLTSETVPEEVLDELSEKQEEQVIEEKEHQLAA
ATAPVAIPGVALAETEELKEEQSSEKAVNVHEEVQSKDEAKCKLHLVDQQEGSASKVELVGRNTDNVEISHGSSSGDKMIAELTEEELTLQGVPADETQT
DMEFGEWEGIERTEIEKRFGVAAAFASSDAGMAALSKLDSDVQLQLQGLLKVAIDGPCYDSTQPLTLRPSSRAKWAAWQKLGNMYPETAMERYMNLLSEA
IPGWMGDNISGTKEHEAGDDAVGSVLTMTSNTINQHDSQGNEDNTGMYEGHLTSSPNPEKGQSSDIPAE

GO Analysis

GO Category	Cellular comBiological Processonent
GO Term	endoplasmic reticulum

GO Category	Biological Process
GO Term	transport

GO Category	Molecular Function
GO Term	lipid binding

GO Category	Molecular Function
GO Term	protein binding

GO Category	Biological Process
GO Term	biological_process

GO Category	Molecular Function
GO Term	binding

GO Category	Cellular comBiological Processonent
GO Term	peroxisome

GO Category	Cellular comBiological Processonent
GO Term	plasma membrane

Presence of Splice variants

YES