LOC_Os03g13740

Expression Profile

RGAP LOCUS ID LOC_Os03g13740
RAP-DB ID Os03g0240600
Function immediate-early fungal elicitor protein CMPG1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Cytoplasmic
score 1.208

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.57
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsUPS|OsPUB41
Function assigned as per literature OsUPS plays an important role in the P(i) signaling pathway through the ubiquitin-26S proteasome system.
Subcellular localization as per literature Chloroplast
Cells used for localization experiment Arabidopsis leaf protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22201023
Reference of localization https://link.springer.com/article/10.1007/s11033-011-1399-5
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.13
NLS score -0.47
Protein Sequence >LOC_Os03g13740.1 protein
MALLARRARKAVMAKAPAPLLQKRGGGAAAELAIPAHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDTGRAVCPVTHAPLRHEDLVPNHAIRRVIQDW
CVANRSRGVERIPTPKIPVTPVQASELLFDVAESAARRGAAGRAAGAVARVRALARDSERNRRCFVSVGTGRVLAAAFESLAAAGEAGVLEDVLAALVCM
MPLDEEAARVLASSSSMGSLVAIAKHGSLAGRLNAVLAIKEAVSRDGAFVDLADDKVDKVVDALVVIIKAPICPQATKAAMVATYHLASSDERVAARVAS
TGLVPTLIEALVDADKSVSEKALAVLDAMLASEEGRASARGHALAMPALVKKMFRVSDVATELAVSAMWRLGCKASSGDEEAAATGCLVEALRVGAFQKL
LLLLQVGCRDATKEKATELLKMLNKHKGLGECVDAVDFRGLNRLS

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Molecular Function
GO Term binding
5
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No