LOC_Os03g13274

Expression Profile

RGAP LOCUS ID LOC_Os03g13274
RAP-DB ID Os03g0235900
Function peptide transporter PTR2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 4.851

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Cytoplasm
score 77
confidence value 0.22
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) NRT1|OsNRT1|OsNRT1.1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.074
NLS score -0.47
Protein Sequence >LOC_Os03g13274.2 protein
MDSSYQHDKPLLDEENSSQVTLEYTGDGSVCIRGHPALRKHTGNWKGSSLAIVFSFCSYLAFTSIVKNLVSYLTKVLHETNVAAARDVATWSGTSYLAPL
VGAFLADSYLGKYCTILIFCTIFIIGLMMLLLSAAVPLISTGPHSWIIWTDPVSSQNIIFFVGLYMVALGYGAQCPCISSFGADQFDDTDENERTKKSSF
FNWTYFVANAGSLISGTVIVWVQDHKGWIWGFTISALFVYLGFGTFIFGSSMYRFQKPGGSPLARICQVVVAAIHKRDKDLPCDSSVLYEFLGQSSAIEG
SRKLEHTTGLKFFDRAAMVTPSDFESDGLLNTWKICTVTQVEELKILIRMFPVWATMILFAAVLDNMFSTFIEQGMVMEKHIGSFEIPAASFQSIDVIAV
LILVPVYERVLVPVFRKFTGRANGITPLQRMGIGLFFSMLSMVSAALVESNRLRIAQDEGLVHRKVAVPMSILWQGPQYFLIGVGEVFSNIGLTEFFYQE
SPDAMRSLCLAFSLANVSAGSYLSSFIVSLVPVFTAREGSPGWIPDNLNEGHLDRFFWMMAGLCFLNMLAFVFCAMRYKCKKAS

GO Analysis
1
GO Category Molecular Function
GO Term transporter activity
2
GO Category Biological Process
GO Term transport
3
GO Category Cellular comBiological Processonent
GO Term vacuole
4
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants YES