LOC_Os03g13170

Expression Profile

RGAP LOCUS ID LOC_Os03g13170
RAP-DB ID Os03g0234200
Function ubiquitin fusion protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto_Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 3.345

3) NUCPRED Prediction
localization Non Nuclear
score 0.57

4) Y-Loc Prediction
localization Cytoplasm
score 53
confidence value 0.21
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) UBQ
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 0
Number of Bipartite 4
Basic residues % 0.209
NLS score 3.43
Protein Sequence >LOC_Os03g13170.1 protein
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCY
ARLHPRAVNCRKKKCGHSNQLRPKKKIKN

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleolus
2
GO Category Cellular comBiological Processonent
GO Term ribosome
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Biological Process
GO Term translation
5
GO Category Molecular Function
GO Term structural molecule activity
Presence of Splice variants No