LOC_Os03g12530

Expression Profile

RGAP LOCUS ID LOC_Os03g12530
RAP-DB ID Os03g0226400
Function cation efflux family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8.5

2) CELLO Prediction
localization PlasmaMembrane
score 2.385

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Nuclear
score 80.14
confidence value 0.29
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMTP8.1
Function assigned as per literature OsMTP8.1 plays an important role in Manganese (Mn) homeostasis, presumably by sequestering Mn specifically into vacuoles in the cells of rice shoots
Subcellular localization as per literature Tonoplast
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23963678
Reference of localization https://academic.oup.com/jxb/article/64/14/4375/684679
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.103
NLS score -0.47
Protein Sequence >LOC_Os03g12530.1 protein
MEAKGENDARAPLLAERRRNSVGSMRGEFVSRLPKKVLDAVDPERPSHVDFSRSKGLREGEKEYYEKQFATLRSFEEVDSIEESNVMSEEDDIAEQKQSE
FAMKISNYANMILLALKIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQPVGIIIFAAVMATLGFQVFVQAVEKLIVNET
PDKLTPVQLTWLYSIMIFATVVKLALWLYCRTSGNKIVRAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVWENAVSLVGES
APPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLKEAHAIGESLQIKIEELPEVERAFVHLDFECDHKPEHNILSKLPSSQP

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No