LOC_Os03g11734

Expression Profile

RGAP LOCUS ID

LOC_Os03g11734

RAP-DB ID

Os03g0216700

Function

MATE efflux protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

vacu

score

2) CELLO Prediction

localization

PlasmaMembrane

score

4.664

3) NUCPRED Prediction

localization

Non Nuclear

score

0.13

4) Y-Loc Prediction

localization

Secreted pathw

score

confidence value

0.61

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsFRDL1

Function assigned as per literature

OsFRDL1 is a transporter that resides in the plasma membrane of cells involved in long-distant transport.

Subcellular localization as per literature

Plasma membrane

Cells used for localization experiment

Onion epidermal cells

NUCLEAR or Not Nuclear

NOT NUCLEAR

PMID

not available

Reference of localization

https://www.tandfonline.com/doi/pdf/10.1080/00380768.2004.10408586

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.079

NLS score

-0.47

Protein Sequence

>LOC_Os03g11734.2 protein
MAGLKKMEEVTAAAAAVAASSTAEKRAAAVVVPDAALTMNGAAGAEEKTAAAAAAPEDLPAPAALSGWPRRVGLYLFVMNIRSVFKLDELGSEVLRIAVP
ASLALAADPLASLVDTAFIGRLGSVEIAAVGVSIAIFNQVSKVCIYPLVSVTTSFVAEEDAIISKCIEENSSQDLEKASPVDSETNNLPVSGPDKVECVN
SCIPTECTNPSDQGCKRKYIPSVTSAVIVGSFLGLLQAVFLVFSAKFVLNIMGVKNDSPMLRPAVRYLTIRSLGAPAVLLSLAMQGVFRGFKDTKTPLYA
TVVGDAANIILDPILMFVCHMGVTGAAVAHVISQYLITMILLCRLIRQVDVIPPSLKSLKFGRFLGCGFLLLARVVAVTFCVTLASSLAARHGPTIMAAF
QICCQLWLATSLLADGLAVAGQAVLASAFAKNDKGKVVVATSRVLQLSIVLGMGLTVVLGVGMKFGAGIFTKDIDVIDVIHKGIPFVAGTQTINSLAFVF
DGINFGASDYTYSAYSMVGVAAISIPCLVYLSAHNGFIGIWIALTIYMSLRTIASTWRMGAARGPWVFLRK

GO Analysis

GO Category	Cellular comBiological Processonent
GO Term	cell

GO Category	Cellular comBiological Processonent
GO Term	membrane

GO Category	Biological Process
GO Term	transport

GO Category	Biological Process
GO Term	cellular process

GO Category	Molecular Function
GO Term	transporter activity

Presence of Splice variants

YES