LOC_Os03g11100

Expression Profile

RGAP LOCUS ID LOC_Os03g11100
RAP-DB ID Os03g0209400
Function vesicle transport protein GOT1B, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 4

2) CELLO Prediction
localization PlasmaMembrane
score 4.387

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.83
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GOT1B|GLUP2
Function assigned as per literature GOT1B plays an important role in mediating COPII vesicle formation at ERESs, thus facilitating anterograde transport of secretory proteins in plant cells.
Subcellular localization as per literature ERESs
Cells used for localization experiment N. benthamiana leaf epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27803308
Reference of localization http://www.plantcell.org/content/plantcell/early/2016/11/01/tpc.16.00717.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.086
NLS score -0.47
Protein Sequence >LOC_Os03g11100.1 protein
MVSFEMNDLKKIGLGLTGFGVFFSFLGIIFFFDKGLIAMGNILFLSGLGLTIGLKSTMQFFTKPKNYKGTISFGAGFFLVLIGWPFFGMLLEAYGFVVLF
SGFWPTLVVFLQRIPIIGWIFQQPFVTSFLDRYRGKRVPV

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No