LOC_Os03g10750

Expression Profile

RGAP LOCUS ID LOC_Os03g10750
RAP-DB ID Os03g0205000
Function CUE domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Nuclear
score 3.953

3) NUCPRED Prediction
localization Non Nuclear
score 0.67

4) Y-Loc Prediction
localization Nuclear
score 68.31
confidence value 0.07
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SPL35
Function assigned as per literature SPL35 regulates cell death and defence response in plants
Subcellular localization as per literature cytosol, ER and punctate compartment(s)
Cells used for localization experiment (N. benthamiana) epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 30771255
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/pbi.13093
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.47
Protein Sequence >LOC_Os03g10750.1 protein
MSSAPPPQQSKPSYNHRRHNNAAPRHHHGQQQQQPQPQPQPQQRYVPKPAAPKPSPPPTLTTALRSSASPSASGAGRVGGEADGFVAYLPHDEVVAAGLG
GPDAQESQAVVDLLNDALAALLRAKPREFWRQVAQNTSLHEFLDSYLQFRHRWYDLPHRAPKGTVAGLVVGELELCRRVFMVLYRISSNKDPGAFRGESL
SMKEHAALLQEKRLLDLPKLLDICAIYGHDNCKLTSSLVENAINVQPNILDGINIVLPQFLGIFHTMQERCMKSLQALTSSGPNDSGYTQLQKDFSEVLD
FVNDAIVTLDAFVDAYQPAALLFCTSFETSYGVEELLNTLPRLYDSLLPSLLHGFQVMSSSQSNGETASDIILSDIVLGIRMLSRRTVSFGWRLLEFCYL
NNQLVERDVEACTKMFPAKVEDPMIRGDIIIQTLKDINREATFSQDHPGKTFLQALEKEFKLMNRIGDIRKKGWIHMDDEQFQFIARLCGSTLTSWNSVP
DLPVSSYGGELQHKNEDTAITESKITQIRDLFPDYGKGFLAACLEAYNQNPEEVIQRILDGTLHQDLLALDTSLEEMPQLKPAATVGKDKGKGILVETEP
QIMNKPHKVNTEMHRYVEHSSSSSVPSASQGPSSSVPSVPQGRFTRKTNDDVPDSATLDSQKAKDAVRSAVLESQYEYDDEYDDSFDDLGFSVVESSYEE
TDGANDAESSSQGPRWSSQKKTQFYVKDGKNYSYKVAGSVAVSSAREAAVLRNVQKDTIHGLGRGGNVPLGVPNRQQHRDMEEEEGSNANNFGRGGSNIG
RGGSYPRGDHGRRGGRDHGDPPPEGENPNGPPGFGRGGRRGGRNHGNQPEANENPNGQRGFGRGATRGGRNHDHPAEDHEDPDAAQGFARGGPAPRGGRG
GRRGGGRDNHHRRDRAMKKHMQGLTGL

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term biological_process
3
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No