LOC_Os03g08640

Expression Profile

RGAP LOCUS ID LOC_Os03g08640
RAP-DB ID Os03g0184700
Function ORC2 - Putative origin recognition complex subunit 2, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 2.19

3) NUCPRED Prediction
localization Non Nuclear
score 0.64

4) Y-Loc Prediction
localization Nuclear
score 99.92
confidence value 0.93
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsORC2
Function assigned as per literature OsORC2 play a role in cell-division and DNA replication
Subcellular localization as per literature Nucleus
Cells used for localization experiment Suspension-cultured tobacco BY2-cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 15939553
Reference of localization https://www.sciencedirect.com/science/article/pii/S037811190500185X
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.108
NLS score 0.1
Protein Sequence >LOC_Os03g08640.1 protein
MALRGGHAAAAAGVSSGSEDDDEEAGFSRSYFLAKEKEPSSGKKRARAAGKLSDLNLVDEQVLRASLAEIPPKHEREVEALTRSYKEQYRNWLFELRCGF
GLLMYGFGSKKMLLEDFASTTLSDFTVIVVNGYLPSINLKQVIVTIAEIFWEQTKLKRKRQTATRSQLQPFASQSIDDIISFLNNQTSDNGDDNVCLLIH
NIDGPALRDAESQQYLAQVSCCPQVHVVASVDHVNAPLLWDKKMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTMKTALVVLQSLTPNAQSVF
RVLAEYQLAHEKEEGMHFSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSDGQDCLHIPLVSDALEKLLQELT

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Biological Process
GO Term biosynthetic process
5
GO Category Biological Process
GO Term DNA metabolic process
Presence of Splice variants YES