LOC_Os03g08360

Expression Profile

RGAP LOCUS ID LOC_Os03g08360
RAP-DB ID Os03g0181500
Function 3-ketoacyl-CoA synthase 10, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 3.339

3) NUCPRED Prediction
localization Non Nuclear
score 0.26

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.16
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ONI1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.127
NLS score -0.47
Protein Sequence >LOC_Os03g08360.1 protein
MAREQALLLTEIVNRGVEPSGPDAGSPTFSVRVRRRLPDFLQSVNLKYVRLGYHYLISHGVYLATIPVIVLVCGAEVGSLSRDELWRKVWGEATYDLATV
LAFLAVLAFTISVYIMSRPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMPRCVFEPGTNCATMKEGRAEASAA
MFAALDELFDKCRVRPKDVGVLVVNCSLFNPTPSLSAMIVNHYKMRGNILSYNLGGMGCSAGVIAVDLARDMLQASGAGLAVVVSTEAVSFTWYAGKRRS
MLIPNAFFRAGCAAVLLSNRRRDFHRAKYQLEHIVRTHKGADDRSFRSVYQEEDEQRIKGLSISRDLVEVGGHALKTNITTLGPLVLPFSEQILFFAGVL
FRHLFPSKTSAPPPPSADGDASAAAPYIPDFKRAFEHFCMHAASRDVLEHLQGNLGLRDGDLEASRAALHRFGNTSSSSIWYELAYLEAKGRVRRGDRVW
QLAFGSGFKCNSAVWRAVRRVRRPARSPWLDCVEQYPARMNA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term cell differentiation
3
GO Category Biological Process
GO Term multicellular organismal development
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term lipid metabolic process
6
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Molecular Function
GO Term transferase activity
9
GO Category Biological Process
GO Term response to stress
10
GO Category Biological Process
GO Term response to abiotic stimulus
11
GO Category Molecular Function
GO Term catalytic activity
12
GO Category Biological Process
GO Term biosynthetic process
Presence of Splice variants YES