LOC_Os03g07920

Expression Profile

RGAP LOCUS ID LOC_Os03g07920
RAP-DB ID Os03g0175800
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 4.055

3) NUCPRED Prediction
localization Non Nuclear
score 0.55

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.13
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BG1
Function assigned as per literature BG1 is a positive regulator of auxin response and transport and plays role in regulating grain size
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Root of the transgenic plants
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26283354
Reference of localization http://www.pnas.org/content/112/35/11102.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.132
NLS score -0.13
Protein Sequence >LOC_Os03g07920.1 protein
MERWAAPKVTAGSARRYVADQPSFSSTLLDAIYKSMDEQPGHGGGATGVEAVAAAAKKQHEAALHYGNYYKPSLAGSYRARAPGPHATTSSSSECSSYGG
FSSSEAESSHHRRLRPIRTTVPGGAPGPAPEKKAKKPGASIRAKLRDLRKPASPGARLAGFLNSIFAGKRAPATPPSATAGAESACSTASSYSRSCLSKT
PSTRGQAKRTVRFLDSDTESLASSTVVDRRRVPVEAVQQMLLQRMEMESDEDDDESSDASSDLFELENFAAIAPAGAAYRDELPVYETTRVALNRAIGHG
YGHGRSARVV

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No