LOC_Os03g07530

Expression Profile

RGAP LOCUS ID LOC_Os03g07530
RAP-DB ID Os03g0171600
Function OsFBK12 - F-box domain and kelch repeat containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization Nuclear
score 1.345

3) NUCPRED Prediction
localization Non Nuclear
score 0.34

4) Y-Loc Prediction
localization Nuclear
score 96.1
confidence value 0.54
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFBK12
Function assigned as per literature OsFBK12 is involved in the 26S proteasome pathway by interacting with Oryza sativa S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN and that it targets the substrate OsSAMS1 for degradation, triggering changes in ethylene levels for the regulation of leaf senescence and grain size
Subcellular localization as per literature Nucleus
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 24144792
Reference of localization http://www.plantphysiol.org/content/163/4/1673.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.109
NLS score -0.47
Protein Sequence >LOC_Os03g07530.1 protein
MMLEGNSCLISRSLPSSCEPESQWAYLSHEVLNGKRPAPEDAEAEDMDEVDFGGGKRSKPPSPQPHTPDISEGHGSSRHVAASGGGEEHGNGSSLIGAIG
RDLTINCLLRLSRSDYGSVASLNKDFRSLVRNGEIYRLRRQSGVAEHWVYFSCNVLEWDAYDPYRERWIQVPKMPPDECFMCSDKESLAVGTELLVFAMA
HIVFRYSILTNSWTRADPMISPRCLFGSTSVGAKAYVAGGTDSSGRILSSAEMYDSETHSWTPLPSMNRARKMCSGVFMDGKFYVVGGVASNNKVLTCGE
EYDLKRRSWRVIENMSEGLNGVTGAPPLIAVVNNELYAADYSEKDVKKYDKQNNKWITLGKLPERSVSMNGWGLAFRACGDRLIVIGGPRTSIGGTIELN
SWTPDERPPVWNLIARRPSGNFVYNCAVMGC

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES