LOC_Os03g07480

Expression Profile

RGAP LOCUS ID LOC_Os03g07480
RAP-DB ID Os03g0170900
Function sucrose transporter, putativ, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 4.551

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Cytoplasm
score 90
confidence value 0.55
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSUT1
Function assigned as per literature OsSUT1 is involved in seed germination, early seedling development and long-distance assimilate transport
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Xenopus laevis oocytes
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22458969
Reference of localization https://pubs.acs.org/doi/10.1021/bi201934h
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.079
NLS score -0.22
Protein Sequence >LOC_Os03g07480.1 protein
MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGM
VVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGP
GTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKG
FRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIA
MAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGMNPNILAAFLDIIRCCLDAGLIHGDLQGSAPAS
STSPSSSLRWSSRWEPGRGTSCSGRGTSRRSASPRDSRSSAASPEYSCCPRSPSASSGRSAWAAVTDRPALAAGCGGGGGRSSAAGSGELCSSRLQWIKG
APSFFLHRVIN

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term transporter activity
6
GO Category Cellular comBiological Processonent
GO Term cell
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES