LOC_Os03g07220
| RGAP LOCUS ID | LOC_Os03g07220 | ||||
| RAP-DB ID | Os03g0168400 | ||||
| Function | PPR repeat domain containing protein, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | chlo | ||||
| score | 5 | ||||
2) CELLO Prediction |
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| localization | PlasmaMembrane | ||||
| score | 3.163 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.64 | ||||
4) Y-Loc Prediction |
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| localization | Chloroplast | ||||
| score | 8 | ||||
| confidence value | 0.29 | ||||
| Number Of Software Predicting Nucleus | 0 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | FLO10 | ||||
| Function assigned as per literature | FLO10 plays an important role in the maintenance of mitochondrial function and endosperm development. | ||||
| Subcellular localization as per literature | Mitochondria | ||||
| Cells used for localization experiment | Nicotiana benthamiana epidermal cells | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 30916395 | ||||
| Reference of localization | https://nph.onlinelibrary.wiley.com/doi/abs/10.1111/nph.15814 | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 1 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.103 | ||||
| NLS score | -0.29 | ||||
| Protein Sequence | >LOC_Os03g07220.1 protein MWKTLQLCSSIHLRRHLRQEPKIICHGYANGASELNSNARSLLKGEICYTGKKKESISVSSSNIAVSSQGIGFSLEQRTGEKCLANSHLDVKLCTGIVKL VIDKCSYIFKSKGGIFDGNCRLQDVLKLGFWLSPETLRPFWRASELKPDDFLNILIGFGPDAAEVKKAIFLWNLYWWASWQSKAFQHLPRSNEIMVSILA NAHMLSQAESLLLLLDGNRVLADAGKLFSQVIQAYAEAGNLGKSISIYDCAQDRCLIPSGSCYQVLLHLLMERRKNDLVLRVYLDMLGAGLGSYTEGDIL DIVVKALIKKDKFLQAIGIIRQLKDLNIQMSKGSLSAVTQEFCKKKDIGDMMNFLEEWRYLPDLLLSNRIIASLCANIGTDEAWLVFQRLEVLGFVPDAT TFGIFIRYSCRELKLKAAFLYLSECFSRHINPKVCAYNAIIGGIFKEGLYRHAKYVFEDMAERKIIPELLTYKILLAGYCRYRQFDEIEQTLRTMETNGI NDIPSGNCVLSKALSFLGLDHLGVKVKRDNAAGYPKAEFFDSVGNGLYLDTDSTKFEASLVQIIDYALYPDISLNLVRACRQGDIASALVLKDETFQWGH DISTASYSELLKALSASPARAMDAINLIDEMADTPDKFDAQNLNLAVQTLSRNGRSACARLAFDRLLRDGFPASQDTYTYLMIGFCIERDIAGFWECWSL ATKHGWSPGSRDVIPLISHLSKWGVIEEALEFISVLLDCYPSLFFSAYCQLLEELCMTGCTSVGCAMLEALIEKGVAVDPSLICNVMEGFLKEHKIAETI GMYDMLLNRNKVLNVSTYQSALSSVARIDAERAMDLVQSVMNMESTDFSTCSSIVKNLLQSGKIGQVMSVFEETVLGKKFNATLLNSFLQAYYCVKNWRK ADAVLCMMLKMQNSLSISSYRFLVRRMCEQSRISSALRLKELIQDRDKSTELILYNILIFYLFRRRHILQVHNLLKDMKSNGFSPDTTTYDFLVNGFHKS GDVDHSINMLDSCIAQGLTPSNRSLRVVLSHHCKLGNLEKSLELFHLIESNGWKHGLVIETTLISSLLSSGRFSEATSCLNSMNKRELIGFDIHFDVLIK ELCLLGDVEMSVSLLNTMLKKGKIPSEVSYDSVVYRLCMLKEFDQALDFLAEMQFANLKPSDMSCDVLIQGLCAMGRTCDAMNILEMLTTIGSSPSYHMY RVVFENCCRSNNLQKAATLLHDMQQAGFSPNFEMHWSVISNLSSNAKRTTGYEKPILSNLISSTQTPVELTELHEIKLMQLNVPFTSEGHDKDVLSIIVY VGGDNADIISLHQIRVLLLVVLAQTLLLAMKDTLELT |
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GO Analysis |
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| 1 |
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| Presence of Splice variants | No | ||||