LOC_Os03g07130

Expression Profile

RGAP LOCUS ID LOC_Os03g07130
RAP-DB ID Os03g0167500
Function RING finger protein 13, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 4

2) CELLO Prediction
localization PlasmaMembrane
score 2.566

3) NUCPRED Prediction
localization Non Nuclear
score 0.48

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.27
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRMR1
Function assigned as per literature OsRMR1 functions as a sorting receptor in transporting vicilin-like storage proteins.
Subcellular localization as per literature Golgi appartus
Cells used for localization experiment rice cultured cells and in developing rice seeds
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21493745
Reference of localization https://www.cell.com/action/showPdf?pii=S1674-2052%2814%2960771-1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.09
NLS score -0.47
Protein Sequence >LOC_Os03g07130.2 protein
MNRRRTMLLLICLCATFCLMTQLGAANVVLMGTNLTLSFDDVEASFAPGVKGSGFEGVVYTAEPLDACSPLTSKAEKGPPSPFALIIRGGCTFDEKVKNA
QDAGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKKFSGHTDVEVWILPAFENSAWSIMAISFISLLAMSAVLATCFFVRRHHIRRDRPR
IPEAREFHGMSSQLVKAMPSLIFTKVQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDASTGIPDPPASETTPLLSSA
VRLPSQSSSFRSSVAASPPRPISRRPSSQSISRIYAASGTPNSPNPIRSFTNSTAMSISRSNVDLSNMSSRPRASHLASAHSLVGSHLSPPINIRYASPH
MSHSGYASPSPHVSSSYVSNSGYGSSSYYLGSSSQHRSYLRRCGESGPSLSTMAPQSPQQSQLRHGGESDLNLAGASSGQSFRQSYLRHCADSEVNLAGA
SSGQSFRQSYLRHCADSDASLSAMASAQSLPGC

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Molecular Function
GO Term binding
Presence of Splice variants YES