| RGAP LOCUS ID |
LOC_Os03g06410 |
| RAP-DB ID |
Os03g0160100 |
| Function |
protein kinase domain containing protein, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
Nuclear |
| score |
5.5 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
3.03 |
3) NUCPRED
Prediction
|
| localization |
Nuclear |
| score |
0.85 |
4) Y-Loc
Prediction
|
| localization |
Mitochondrion |
| score |
|
| confidence value |
0.01 |
| Number Of Software Predicting Nucleus |
3 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsEDR1|OsACDR1|OsMAPKKK1|SPL3 |
| Function assigned as per literature |
|
| Subcellular localization as per literature |
Nucleus |
| Cells used for localization experiment |
Rce protoplast |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
19904499 |
| Reference of localization |
https://link.springer.com/article/10.1007/s10059-009-0161-5 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.107 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g06410.1 protein
MKNLFKSKIKWQHRSNDPASSQGQGQGLPQQTPPSPSPASSPSGGPPALSVSTVSSSSPSAAATPTGAAAAGAGGGGGGTGGEDYMLSEEEFQMQLAMAL
SASNSECVGDLDGEQIRKAKLISLGRGDRFAAVRDDEQTADALSRRYRDYNFLDYHEKVIDGFYDIFGPSMESSKQGKMPSLADLQTGIGDLGFEVIVIN
RAIDTTLQEMEQVAQCILLDFPVANIAALVQRIAELVTDHMGGPVKDANDMLTRWLEKSTELRTSLHTSLLPIGCIKIGLSRHRALLFKILADSVGIPCK
LVKGSNYTGDDDDAINIIKMNEREFLVDLMAAPGTLIPSDVLSWKGNSLNSNARLTQNPLAGSSSTTDSNLSANALPPGHKGGQLPLFSSGDWISASQSG
YEKDGATTSSQASSSGTTSVAAGSAFDSSWTLVSHGQSDDPSTSAGMSAQQKVILPGGEHPWNENINARNENIKLVSDLQGNSESINLFADLNPFGGREP
KRTSVPLNGPDNRNNELQRRRENVVPSTRRPQQRLVMKNWSPYNDVSNNKQYNYVEDSFARRNIGDNAASSSQVPRPSAKNTNLNVVVRTDTPYMAAHNY
DNSMAGSSAMKMTSTAGIGKVPDKVLYGDLDKGLTNSRLGDQPPIERHKWGNSVEGRIPTGTVHNQAKEHKENFDGKQDNKKLHPDPKKSPLDRFMDTSM
PSRNPESVSPSFARSHKLDTMFDDVSECEIHWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFYGDALDEFRSEVRIMRRLRHPNIVLFMGAVT
RPPNLSIVSEYLPRGSLYKILHRPNCQIDEKRRIKMALDVAKGMNCLHISVPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSKSTAGTPEWM
APEVLRNEQSNEKCDVYSFGVILWELATLRMPWSGMNPMQVVGAVGFQDKRLDIPKEIDPLVARIIWECWQKDPNLRPSFAQLTSALKTVQRLVTPSHQE
SQSPPVPQEIWVNSSTP |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
endoplasmic reticulum |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
response to biotic stimulus |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 9 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
endosome |
|
| 10 |
| GO Category |
Molecular Function |
| GO Term |
kinase activity |
|
| 11 |
| GO Category |
Molecular Function |
| GO Term |
signal transducer activity |
|
| 12 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 13 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 14 |
| GO Category |
Biological Process |
| GO Term |
cell death |
|
| 15 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
Golgi apparatus |
|
| Presence of Splice variants |
No |
