LOC_Os03g05420

Expression Profile

RGAP LOCUS ID LOC_Os03g05420
RAP-DB ID Os03g0147700
Function MT-A70 domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7

2) CELLO Prediction
localization Nuclear
score 3.678

3) NUCPRED Prediction
localization Non Nuclear
score 0.55

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 1
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMTA3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.135
NLS score -0.47
Protein Sequence >LOC_Os03g05420.1 protein
MDSRSPKIPRRSPDDSKDKDSDRNRGRDEKNDWDSSRTYGSETDCKEERCDTNKRKGSAMGEDVGDDSRSVDRSHETEVHVFNDKQDKAVEIKNILHDGV
GQSDYGQRQLGLDNERRNGTVDKSRVDAHIDDKLGSGRDRNWTGKTQEPEGSVDYLRSCKSQDSKEASDSEWKNAQERQDGGGFHGRVGYRRDFRGRSES
TRGSSTYGSRYDTSDSIEIRPNNSLDFGREGSVSGRYDVGVGAHRDVTYGTNGDKVTNSEPDQSGSASMISQFPQHGHKGDRPSRGGRGRPNGRDSQRVG
VTLPIMPPPFGPLGLPPGPMQHIGPNIPHSPGHPLLPGVFVPPFPGGPLLWPGARGVDVNMLSVPPNLPIPPPVAGEHSFTPGMGAGPNIHLNQFGSGIG
APTNMSGLSFHQLGTQSREMVHGKPPVGGGWTPNRNSGPTRKAPSRGEQNDYSQNFVDTGMRPQNFIRELDLTSVAEDYPKLRELIQRKDEIVAKSASPP
MYYKCDLRQHVLSPEFFGTKFDVILVDPPWEEYVHRAPGITDHIEYWNGEEIMNLKIEAIADTPSFVFLWVGDGVGLEQGRQCLKKWGFRRCEDVCWVKT
NKKSATPSLRHDSHTILQHSKEHCLMGIKGTVRRSTDGHVIHANIDTDIIIADEPTDGSTKKPEDMYRIIEHFALGKRRLELFGEDHNIRPGWLTLGKGL
SYSNFNKEAYVKNFADKDGKVWQGGRNPPPEAPHLVVTTPEIEGLRPKSPPHK

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term reproduction
6
GO Category Biological Process
GO Term post-embryonic development
7
GO Category Biological Process
GO Term embryo development
8
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants YES