LOC_Os03g05390

Expression Profile

RGAP LOCUS ID LOC_Os03g05390
RAP-DB ID Os03g0147400
Function Citrate transporter protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 4.919

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.74
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Z3
Function assigned as per literature Z3 plays an important role in citrate transport and distributionduring leaf development and is a possible candidate for a CitMHS family member in plants
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion epidermal cells 
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29305728
Reference of localization https://thericejournal.springeropen.com/articles/10.1186/s12284-017-0196-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.077
NLS score -0.47
Protein Sequence >LOC_Os03g05390.6 protein
MALAGTSKVVLGCVAFGIFWVLAVFPTVPFMPVGRTAGSLLGAMLMVLFRVISPEDAYAAIDLPIIGLLFGTMVVSIFLERADMFKYLGNLLSWKSRGSK
DLLFRVCIVSAIASALFTNDTCCVVLTEFILKVARQNNLPPQPFLLALATSSNIGSAATPIGNPQNLVIAVESGISFGQFLLGVFPAMIVGVLTNAAILL
CYFWKYLSVEKDQEGGQPAGPEVVADDEVTSHRFTPARMSHVSSLNPDDMDCISEPIIRSNSVRSTSANENLRSRSVNSEADIQLAIKSLRASSMSHEMV
EVSTVTDRRDEGASSRKFTRTASQQRSVIIEDSPPSPASNGDKEKEDEVAEKRWRVFVWKTAVYLITLGMLIALLMGLNMSWTAITAALVLLALDFTDAQ
ACLEKVSYSLLIFFCGMFITVDGFNKTGIPNTLWELVEPYSRIDSAKGVALLAVVILILSNVASNVPTVLLLGTRVAASAAAISHDSERKAWLILAWVST
VAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGLLIVTSY

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Cellular comBiological Processonent
GO Term cell
5
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants YES