| RGAP LOCUS ID |
LOC_Os03g03810 |
| RAP-DB ID |
Os03g0130300 |
| Function |
DEF8 - Defensin and Defensin-like DEFL family, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
extr |
| score |
13 |
2) CELLO
Prediction
|
| localization |
Extracellular |
| score |
3.739 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.07 |
4) Y-Loc
Prediction
|
| localization |
Secreted pathw |
| score |
|
| confidence value |
1 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsDEF8 |
| Function assigned as per literature |
OsDEF8 may be involved in the abiotic stress response |
| Subcellular localization as per literature |
Apoplastic region |
| Cells used for localization experiment |
Nicotiana benthamiana and tobacco BY-2 cell leaves |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
29414311 |
| Reference of localization |
https://www.sciencedirect.com/science/article/abs/pii/S0981942818300172 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.136 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g03810.1 protein
MEASRKVFSAMLLMVLLLAATGEMGGPVMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPDGYCHGVRRRCMCTKPCP |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cell wall |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| 5 |
| GO Category |
Molecular Function |
| GO Term |
enzyme regulator activity |
|
| Presence of Splice variants |
No |
