LOC_Os03g03720

Expression Profile

RGAP LOCUS ID LOC_Os03g03720
RAP-DB ID Os03g0129300
Function glyceraldehyde-3-phosphate dehydrogenase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Chloroplast
score 3.562

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.69
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GADPH
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.106
NLS score -0.47
Protein Sequence >LOC_Os03g03720.1 protein
MATHAALAASRIPATARLHSKAASKQRVDFADFSGLRPGSCSISHAAREASFSDVLGSQLVARATGENAVRAPAEAKLKVAINGFGRIGRNFLRCWHERE
NSPLEVVVVNDSGGVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP
AKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLP
QLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYS
QRVVDLAHLVASKWPGAAVQGSGDPLEDFCKDNPETDECKVYEN

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term extracellular region
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Cellular comBiological Processonent
GO Term thylakoid
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Biological Process
GO Term carbohydrate metabolic process
7
GO Category Biological Process
GO Term generation of precursor metabolites and energy
8
GO Category Biological Process
GO Term catabolic process
9
GO Category Biological Process
GO Term metabolic process
10
GO Category Molecular Function
GO Term protein binding
11
GO Category Biological Process
GO Term response to stress
12
GO Category Biological Process
GO Term biological_process
13
GO Category Molecular Function
GO Term catalytic activity
14
GO Category Biological Process
GO Term biosynthetic process
15
GO Category Biological Process
GO Term photosynthesis
Presence of Splice variants YES