LOC_Os03g02680

Expression Profile

RGAP LOCUS ID LOC_Os03g02680
RAP-DB ID Os03g0118400
Function cyclin-dependent kinase A-1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Cytoplasmic
score 3.364

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.98
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) cdc2Os-1|CDKA1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.12
NLS score -0.47
Protein Sequence >LOC_Os03g02680.1 protein
MEQVSASSDLIRFLFLGDSGVLILQTFACFCGCVCGGGGAQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGN
IVRLHDVIHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTH
EVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLD
LLSKMLRYEPNKRITARQALEHEYFKDLEMVQ

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term multicellular organismal development
4
GO Category Biological Process
GO Term DNA metabolic process
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term cell cycle
7
GO Category Cellular comBiological Processonent
GO Term cytoskeleton
8
GO Category Cellular comBiological Processonent
GO Term cytoplasm
9
GO Category Molecular Function
GO Term kinase activity
10
GO Category Molecular Function
GO Term protein binding
11
GO Category Cellular comBiological Processonent
GO Term cytosol
12
GO Category Cellular comBiological Processonent
GO Term plasma membrane
13
GO Category Cellular comBiological Processonent
GO Term nucleus
14
GO Category Biological Process
GO Term response to stress
15
GO Category Biological Process
GO Term response to abiotic stimulus
16
GO Category Biological Process
GO Term protein modification process
17
GO Category Biological Process
GO Term reproduction
18
GO Category Biological Process
GO Term post-embryonic development
19
GO Category Biological Process
GO Term embryo development
Presence of Splice variants YES