LOC_Os03g02010

Expression Profile

RGAP LOCUS ID

LOC_Os03g02010

RAP-DB ID

Os03g0110800

Function

DNA methyltransferase protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

Nuclear

score

2) CELLO Prediction

localization

Nuclear

score

2.592

3) NUCPRED Prediction

localization

Non Nuclear

score

0.66

4) Y-Loc Prediction

localization

Nuclear

score

99.82

confidence value

0.96

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsDRM2

Function assigned as per literature

OsDRM2 is responsible for de novo,CG and non-CG methylation in rice genomic sequences, and that DNA methylation regulated by OsDRM2 isessential for proper rice development in both vegetative and reproductive stages

Subcellular localization as per literature

Nucleus

Cells used for localization experiment

Onion epidermis cells

NUCLEAR or Not Nuclear

NUCLEAR

PMID

22380881

Reference of localization

https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1365-313X.2012.04974.x

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.114

NLS score

0.65

Protein Sequence

>LOC_Os03g02010.4 protein
MQAIGGDASVGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQEMSEKDEKMKSLVNMGFPEDEAKMAIDRCLDAPVAVLVDSI
YASQEAGNGYSANLSDYEDTEFSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERLRSVHRNLPDQALGPPFFYYENV
ALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALGRF
SDVPTPQVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTRGVSRTERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVAL
HRLGIHMKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAGSNRHHRDGLEGEHSALFYDYIRILEHV
KATMSAV

GO Analysis

GO Category	Cellular comBiological Processonent
GO Term	nucleus

GO Category	Biological Process
GO Term	metabolic process

GO Category	Biological Process
GO Term	cellular process

GO Category	Molecular Function
GO Term	transferase activity

GO Category	Biological Process
GO Term	cellular component organization

GO Category	Biological Process
GO Term	protein modification process

GO Category	Biological Process
GO Term	regulation of gene expression, epigenetic

GO Category	Biological Process
GO Term	DNA metabolic process

Presence of Splice variants