| RGAP LOCUS ID |
LOC_Os02g58730 |
| RAP-DB ID |
Os02g0834000 |
| Function |
ras-related protein, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
5 |
2) CELLO
Prediction
|
| localization |
Chloroplast |
| score |
1.147 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.18 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
96 |
| confidence value |
0.61 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsRacD|OsRac5 |
| Function assigned as per literature |
OsRac5 is involved in rice growth and development |
| Subcellular localization as per literature |
Cytoplasm when interacts with OsMY1 |
| Cells used for localization experiment |
Onion epidermal cells |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
24464125 |
| Reference of localization |
https://link.springer.com/article/10.1007%2Fs11033-014-3032-x |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
3 |
| Number of PAT7 |
2 |
| Number of Bipartite |
0 |
| Basic residues % |
0.132 |
| NLS score |
1.24 |
| Protein Sequence |
>LOC_Os02g58730.1 protein
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKW
IPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQPPKQKKKKKKAQKGCAIL |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
catabolic process |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoplasm |
|
| 5 |
| GO Category |
Molecular Function |
| GO Term |
hydrolase activity |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleolus |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cell |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 9 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoskeleton |
|
| 10 |
| GO Category |
Molecular Function |
| GO Term |
nucleotide binding |
|
| 11 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| 12 |
| GO Category |
Biological Process |
| GO Term |
transport |
|
| Presence of Splice variants |
YES |
